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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
UCEC rs4945386 chr11:79648379 C/T HCK chr20:30639991-30689659:+ 0.79 8.13 1.39E-13 Box Plot
UCEC rs55855548 chr5:8209773 G/C GAGE2C chrX:49226182-49233481:+ 0.58 7.03 6.44E-11 Box Plot
UCEC rs58470119 chr13:37547520 T/C PPP3R1 chr2:68405989-68483369:- 0.82 6.96 9.52E-11 Box Plot
UCEC rs59309723 chr9:37389245 T/G C22orf42 chr22:32544993-32555309:- 0.84 6.96 9.64E-11 Box Plot
UCEC rs595234 chr11:49201668 C/G FOLH1B chr11:89372395-89431886:+ 0.57 7.24 2.05E-11 Box Plot
UCEC rs596712 chr11:49201371 C/T FOLH1B chr11:89372395-89431886:+ 0.57 7.41 8.35E-12 Box Plot
UCEC rs6033557 chr20:1348542 A/G FKBP1AP1 chr19:58337829-58338146:- 0.69 8.62 7.95E-15 Box Plot
UCEC rs6041884 chr20:1364598 A/G FKBP1AP1 chr19:58337829-58338146:- 0.65 7.8 9.11E-13 Box Plot
UCEC rs60442601 chr9:130518716 G/T FAM18B chr17:18684582-18710026:+ 0.77 7.34 1.17E-11 Box Plot
UCEC rs607065 chr11:49240670 T/C FOLH1B chr11:89372395-89431886:+ 0.57 7.37 9.94E-12 Box Plot
UCEC rs611414 chr11:49246281 T/C FOLH1B chr11:89372395-89431886:+ 0.57 7.13 3.79E-11 Box Plot
UCEC rs62126563 chr2:19640431 C/T DOCK10 chr2:225629807-225907162:- 0.74 6.9 1.29E-10 Box Plot
UCEC rs628506 chr5:176534423 A/C LOC388955 chr2:63849182-63850159:- -0.62 -7.52 4.49E-12 Box Plot
UCEC rs635976 chr11:49240229 G/A FOLH1B chr11:89372395-89431886:+ 0.57 7.21 2.4E-11 Box Plot
UCEC rs653212 chr11:49189552 C/G FOLH1B chr11:89372395-89431886:+ 0.58 7.55 3.82E-12 Box Plot